BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F08SP1|AL430578
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1865 0.0
>3x_Contig1795
Length = 38452
Score = 1865 bits (940), Expect = 0.0
Identities = 957/961 (99%), Gaps = 2/961 (0%)
Strand = Plus / Plus
Query: 1 ggtgtccctactttgactcaccgggcctggtgtgtcctggaaatcgaataagtccgaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19243 ggtgtccctactttgactcaccgggcctggtgtgtcctggaaatcgaataagtccgaagt 19302
Query: 61 ttcttcgttaattttaggctggtactcttctgttgaggcacgcattccgtttccattatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19303 ttcttcgttaattttaggctggtactcttctgttgaggcacgcattccgtttccattatc 19362
Query: 121 ctgaccgtagg-caagggcttttggtagccttcgtcatcgtcactgtcgaaatcggcact 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19363 ctgaccgtagggcaagggcttttggtagccttcgtcatcgtcactgtcgaaatcggcact 19422
Query: 180 taccgagatcccatggctagtagattttgtatatccggcacgg-aatttatgtttgctcc 238
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 19423 taccgagatcccatggctagtagattttgtatatccggcacgggaatttatgtttgctcc 19482
Query: 239 tgacccagaaactacacctccagcaacgcctttgtatttctttaaagtctctctggcctt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19483 tgacccagaaactacacctccagcaacgcctttgtatttctttaaagtctctctggcctt 19542
Query: 299 ctttctttcttgtctgatctgttcatcgctctctagtagcttaactagctgactggctct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19543 ctttctttcttgtctgatctgttcatcgctctctagtagcttaactagctgactggctct 19602
Query: 359 attcctcacattgatcccytggtctcttccctgcgagtcaatgtaatggaaactttccag 418
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 19603 attcctcacattgatcccttggtctcttccctgcgagtcaatgtaatggaaactttccag 19662
Query: 419 catctttaccaaattcaggttcgtgcgtacatcgtcaataaacctctcactaccatgctt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19663 catctttaccaaattcaggttcgtgcgtacatcgtcaataaacctctcactaccatgctt 19722
Query: 479 gaccaaatattccaatagttgtaacgccttgtaaatctgtctccattcactggctgtctt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19723 gaccaaatattccaatagttgtaacgccttgtaaatctgtctccattcactggctgtctt 19782
Query: 539 ctcagtgaaacgncgaaatatcattcccaaaatctcttctctttctctataattataggt 598
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19783 ctcagtgaaacgtcgaaatatcattcccaaaatctcttctctttctctataattataggt 19842
Query: 599 cccctgagcaatatgttccataagggttgaagaagcgccccatggctcattgttcgtggc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19843 cccctgagcaatatgttccataagggttgaagaagcgccccatggctcattgttcgtggc 19902
Query: 659 ctctctcactttcgcctccatttcagtatagttaaagaccacattttgagcctttctgaa 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19903 ctctctcactttcgcctccatttcagtatagttaaagaccacattttgagcctttctgaa 19962
Query: 719 gtatttcttagcatcataaagagagagtttcgttatcgtatcctctaatgacatgactcc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19963 gtatttcttagcatcataaagagagagtttcgttatcgtatcctctaatgacatgactcc 20022
Query: 779 ttatatgcactatcgataaagctgccgtataaataaatctccgatagaaagttagtgaac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20023 ttatatgcactatcgataaagctgccgtataaataaatctccgatagaaagttagtgaac 20082
Query: 839 tcgcgtgttaacaggctgatatagagttacagtataaaattattatgtgtattgtctgtt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20083 tcgcgtgttaacaggctgatatagagttacagtataaaattattatgtgtattgtctgtt 20142
Query: 899 taacctcgtggctaaggtgcgattttggcactgaatttgaaatcagagatattactttac 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20143 taacctcgtggctaaggtgcgattttggcactgaatttgaaatcagagatattactttac 20202
Query: 959 c 959
|
Sbjct: 20203 c 20203
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6272
Number of Sequences: 1807
Number of extensions: 6272
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)